Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015894176.1_cds_XP_016447503.1_42256
CDS Infomation

[gene=LOC107772515] [db_xref=GeneID:107772515] [protein=aspartyl protease family protein 2-like] [protein_id=XP_016447503.1] [location=complement(6372..7904)] [gbkey=CDS]
Sequence

ATGCTCTCCCCTTCCCACTATCACTTCACCATTTTTCCTTCCCCAAATCTCTGTAAAATG
GAAGAAAAACCCATTTCCATTTCCTTCCTCTTCACTTTCCCGTCCATTTTCCTTTCCCTC
TTTGCCATTTCTGTGTCTTCCACTTCCCCTCAATACCAAACATTAGTCTTGAACTCCCTT
CCCAACTCCGAACCTCAGTCCCTCTCATGGGCTACCGAAGATTTCGAAGCCCAACTTTCC
GGCGATGGGTCAAACCCGGATCCGGATACCACACTTTCTGTACAGTTGCATCACGTCGAC
TTAGTATCTCCTTCATCCTTCAATGCTACACCTCACGCTTTGTTCAAACTACGTCTCCAA
CGTGACGCTGCTAGAGCTAAGGCACTTTCAGATCTCGCTGCAGCTAATATCACCGTCGGC
CGCCGCGGCGGAGGGCACCATGTTGTCGGCAGTAGGGACTTCTCTAGTTCTGTTACTTCT
GGACTCGCTCAGGGTAGTGGCGAGTACTTCACGCGCCTTGGTGTTGGCACTCCTCCCAAG
TATGCTTACATGGTGTTGGACACTGGAAGTGACGTCGTTTGGATCCAGTGTTCTCCTTGC
AAGAAATGCTACACTCAATCCGACCCGGTTTTTGACCCGACTAAATCCACCTCCTTCCTT
GGTGTTTCATGTGGGTCCCCTTTGTGCCGCCGGTTGGATTCTCCGGGCTGTAACCGCAAG
AAGTGCCTTTACCAAGTTTCATACGGCGACGGTTCTTTCACCGTCGGTGATTTTTCAACT
GAAACGTTAACTTTCCGTAAGACACGTGTAAACAACGTGGCCCTTGGATGCGGCCACGAT
AATGAAGGTTTATTCGTGGGAGCCGCCGGGTTACTCGGTCTCGGCCGGGGAAGACTGTCA
TTTCCGACTCAAGCCGGTCGGCGGTTCGGCCGGAAATTTTCTTACTGCCTTGTGGACCGC
TCTGCTTCCTCTAGACCGTCGTACATAGTTTTCGGTGAATCAGCTGTCTCTCGAACCGCC
GTGTTTACCCCACTCGTAAATAACCCAAAACTCGACACCTTTTACTACGTGGAGCTCACC
GGAATCAGCGTCGGCGGCACTAGGGTTCCATCCATTAGGCCGTCACTGTTCAAGCTAGAC
GCAGCCGGTGATGGTGGGGTGATAGTGGATTCAGGAACTTCAGTGACCCGGTTGACCCGA
CCCGCTTACGTGGCACTGAGGGACTCTTTCAGAATGGGTGCTGCAAATCTGAAGAGAGCA
CCGGATTTCTCGTTGTTCGACACGTGTTTTGATCTGTCAGGGAAGACGGAAGTTAAAGTT
CCGACGGTGGTTCTGCATTTCAAGGGAGCTGAGGTGTCATTGCCGGCGTCGAATTACTTG
ATTCCGGTGGACAGTGATGGAACATTCTGCTTCGCATTTGCGGGTACAATGAGTGGATTA
TCAATTATTGGAAACATTCAACAGCAAGGTTTTAGGGTAGTGTTTGATCTTGCTGGTTCT
CGCTTAGGATTTGCTCCTCGTGGCTGTGCTTAA

Peptide Sequence

PEP ID

XP_016447503.1
PEP Infomation

PREDICTED: aspartyl protease family protein 2-like [Nicotiana tabacum]
Sequence

MLSPSHYHFTIFPSPNLCKMEEKPISISFLFTFPSIFLSLFAISVSSTSPQYQTLVLNSL
PNSEPQSLSWATEDFEAQLSGDGSNPDPDTTLSVQLHHVDLVSPSSFNATPHALFKLRLQ
RDAARAKALSDLAAANITVGRRGGGHHVVGSRDFSSSVTSGLAQGSGEYFTRLGVGTPPK
YAYMVLDTGSDVVWIQCSPCKKCYTQSDPVFDPTKSTSFLGVSCGSPLCRRLDSPGCNRK
KCLYQVSYGDGSFTVGDFSTETLTFRKTRVNNVALGCGHDNEGLFVGAAGLLGLGRGRLS
FPTQAGRRFGRKFSYCLVDRSASSRPSYIVFGESAVSRTAVFTPLVNNPKLDTFYYVELT
GISVGGTRVPSIRPSLFKLDAAGDGGVIVDSGTSVTRLTRPAYVALRDSFRMGAANLKRA
PDFSLFDTCFDLSGKTEVKVPTVVLHFKGAEVSLPASNYLIPVDSDGTFCFAFAGTMSGL
SIIGNIQQQGFRVVFDLAGSRLGFAPRGCA

Transcript Sequence

Gene sequence data has not been registered.